Insertion junction: CLIP2.067962_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067962
Chromosome:chromosome 8
Location:3763201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGTTCGGATCCCCCAGCGCCTGCTCCTGAGACTTTATTATTGTAACC
Internal bar code:CGCAAACCTTAGCGACCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGTGACAAGCGCGTTAG
Suggested primer 2:TGGTTTTAGTGCTTGCGTGC