Insertion junction: CLIP2.067967_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067967
Chromosome:chromosome 17
Location:688308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700600 (1 of 8) PTHR26379//PTHR26379:SF144 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN 19 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTCTCCTTCACCTGTCCAATAGAACGAGATGGCTAGGACACGGTCTT
Internal bar code:ACGGAAATCATGGGGTTAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGGAGCCAAGCCTGAAA
Suggested primer 2:TTGTGGCTACTATGGTGCGG