Insertion junction: CLIP2.067979_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067979
Chromosome:chromosome 1
Location:7751940
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g054600 (1 of 8) IPR000157 - Toll/interleukin-1 receptor homology (TIR) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCGCACCTTCAGGCCTTTGCAAAGCGCATTCAGGTGCGGCACACCA
Internal bar code:TCTGTGTGGATGGACTAGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGCACCACTGTTGAGG
Suggested primer 2:TACTGACAGAGGCTTTGGCG