Insertion junction: CLIP2.067981_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067981
Chromosome:chromosome 12
Location:762367
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g492500 (1 of 39) IPR009003 - Peptidase S1, PA clan intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGAGGCGCGGGCGCGAGCAGCAGTACTTGTGCTGCTGAGCCAGGCGC
Internal bar code:GGCTCGGGAGCGGAACCGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2269
LEAP-Seq percent confirming:37.8378
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAATGTGGCGACAACGT
Suggested primer 2:ATGGCGAATGACCTAGAGCG