Insertion junction: CLIP2.067988_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067988
Chromosome:chromosome 12
Location:5085979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525750 (1 of 8) IPR000719//IPR002290//IPR011009//IPR020635//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGCTCAAGCAGGCAGTCCTACCCCGCAACGTACGTACATGCACAGTT
Internal bar code:GATTCTTTTTGGGTGGACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4242
LEAP-Seq percent confirming:81.6456
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:158

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGCAAGTAGCTGTGAT
Suggested primer 2:GCTGTGTCCAACAAGTGCTG