Insertion junction: CLIP2.067988_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067988
Chromosome:chromosome 12
Location:5085983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525750 (1 of 8) IPR000719//IPR002290//IPR011009//IPR020635//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCACTTGATGTGGTGCTGTGTGCGGTGCCGCAAAGTAACCAACGAC
Internal bar code:GATTCTTTTTGGGTGGACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGTCCAACAAGTGCTG
Suggested primer 2:GGGTGGCAAGTAGCTGTGAT