Insertion junction: CLIP2.067996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067996
Chromosome:chromosome 10
Location:3525012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444900 MFT4,MAE4 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGCATTCGCTGTTCCCTGTTCGTTTGCGCCAAAAGCAAACCCGGGC
Internal bar code:CGCGGAGTCGAGAGGCGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4140
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCTCCATGGCTGTCACG
Suggested primer 2:ATCTGCCCGGCTTCAATCAA