Insertion junction: CLIP2.068000_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068000
Chromosome:chromosome 14
Location:3048936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627950 SRD2 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; (1 of 1) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTCCAGCCTCGCCTTCAGCTCGAATGAATGCAGCGCGCCCCCATGC
Internal bar code:CTCGACGAGTCTCTGGTTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTCGGTAAGAGCGCTG
Suggested primer 2:TGTGGCCCTCACTTAAGCTG