Insertion junction: CLIP2.068001_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068001
Chromosome:chromosome 11
Location:931673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467657 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTGCTAAAGTGTCCGTTTCCCATGCGAGGGGAACCACATATATTGT
Internal bar code:TCGTTTGGTGAACGGGAATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1265
LEAP-Seq percent confirming:70.7317
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAACCCCGCCTCCATGTA
Suggested primer 2:CGGATTGCAAATGCGCAGTA