Insertion junction: CLIP2.068002_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068002
Chromosome:chromosome 10
Location:6643485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466200 CYCAB1 A/B-type cyclin; (1 of 3) K06627 - cyclin A (CCNA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTCCGGCCGTGACGGGGGCCCCAGTCGCAGTGTTAATGGGACCCAA
Internal bar code:TCCAATCGGAATTGTCAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGTGACAGCGAGGTCC
Suggested primer 2:CACCACCCCCTCTCAATGTC