Insertion junction: CLIP2.068002_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068002
Chromosome:chromosome 10
Location:6643486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466200 CYCAB1 A/B-type cyclin; (1 of 3) K06627 - cyclin A (CCNA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGGCGTCGATTATGGAGACGAGCCTTGCCTCTGGGAAGCGCCTGGC
Internal bar code:TCCAATCGGAATTGTCAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1723
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCCCCTCTCAATGTC
Suggested primer 2:TTTCTGTGACAGCGAGGTCC