Insertion junction: CLIP2.068005_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068005
Chromosome:chromosome 3
Location:656330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145667 (1 of 1) PTHR13060//PTHR13060:SF0 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 // PROTEIN SGT1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGTGTTGCACGATTGGTCATCACGGCGGGCCATGTGTTTATATTAAA
Internal bar code:CTGGAACCTGGCTGTTGACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4257
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACGCTTTCTGCTGTGT
Suggested primer 2:GCTTTCTATCTGGGCCAGGG