Insertion junction: CLIP2.068011_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068011
Chromosome:chromosome 6
Location:3224194
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g276759 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTTCGTGCCCGGCGGCTGTCTCCTCGGCCCGTGCCTCGCCCGGCAAC
Internal bar code:GAGCGGACCCTTTTCCGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:556
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACATGGACGGGCATGG
Suggested primer 2:CTCCGTGAAGATGTCGGGAG