Insertion junction: CLIP2.068011_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068011
Chromosome:chromosome 17
Location:2174840
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g712300 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGCGCCTTCATCCCCGGGCCGATGGCGCTGGCTGAGGAGGAGGCGG
Internal bar code:ATAGTGTAGTCAACATTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGAGGTAGTTGCCAGG
Suggested primer 2:GTGTGTTTGTGTGACGAGGC