Insertion junction: CLIP2.068012_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068012
Chromosome:chromosome 12
Location:8646031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548050 CYG32 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 3'UTR
Cre12.g548100 UBC7 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT); Putative Ubiquitin-protein ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCATTGCAGTAAGTGTAGGATGCACTCTTGTCGCGCAATGGAAGGCG
Internal bar code:TTGATATATTAGCGGTAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2709
LEAP-Seq percent confirming:57.5
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTGCTGGTTGCTGGTTG
Suggested primer 2:AGTGTCATGGTCACGCACAT