Insertion junction: CLIP2.068013_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068013
Chromosome:chromosome 12
Location:5484019
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g529950 EIF4G1,EIF4G (1 of 2) K03260 - translation initiation factor 4G (EIF4G); Eukaryotic translation initiation factor 4, gamma subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAGTAACGGGGCCATCCGTGGCTCTCGCCAACGCCGCGTCCCCACAC
Internal bar code:GGAAATTCTACGGTTACCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:721
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTTCCTCCCATCACGG
Suggested primer 2:ACTGCGAAGACGTTTAGGCA