Insertion junction: CLIP2.068016_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068016
Chromosome:chromosome 8
Location:382271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358579 (1 of 1) PTHR10984:SF32 - ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 5'UTR
Cre08.g358580 CMPL1,CMP1 Carbamoyl phosphate synthase, large subunit; (1 of 1) K01955 - carbamoyl-phosphate synthase large subunit (carB, CPA2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCACCTTCACCGCGGTAATCAATTCAGTACACTTGCTGCATGCGCGA
Internal bar code:TAGTGAAACAAGGGCGATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGCGAGCAATACTCCA
Suggested primer 2:GAAAGTAGCGCATGCAGCTC