Insertion junction: CLIP2.068017_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068017
Chromosome:chromosome 12
Location:9154338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTTGCCCAAGTTTGGTGTGAAATCCCCACCAGTTTCTCGCTGAGTTT
Internal bar code:TAAATTGAATCATAGCAAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5105
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:TGCGGTGAGTTGTTTGCATG