Insertion junction: CLIP2.068023_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068023
Chromosome:chromosome 1
Location:3355321
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g021750 (1 of 1) PF07818 - HCNGP-like protein (HCNGP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCAAATGCGACAGTAGGTGGCACTCGCACCGCCGTGGTGAAGATCC
Internal bar code:AGGCTAGGCCTACTTTAGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGCCCCGCAGATAACCC
Suggested primer 2:CATGTTATGACTGCGCCGTG