Insertion junction: CLIP2.068027_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068027
Chromosome:chromosome 1
Location:3948217
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g025900 (1 of 7) PF00415//PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Regulator of chromosome condensation (RCC1) repeat (RCC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACCCCACCCTGACGCCCCCATACACACCCACCCACCCCACCCTCC
Internal bar code:ATTGTTTGTAGGGTAAACGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1480
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGGCTCTGGTACCGA
Suggested primer 2:ACAGAAACAGCACGCAACAC