Insertion junction: CLIP2.068037_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068037
Chromosome:chromosome 11
Location:613001
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467610 (1 of 3) PTHR10751//PTHR10751:SF2 - GUANYLATE BINDING PROTEIN // GUANYLATE-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTGCGACCACAACTAGTCGCCCCTTACTGAGCCCGCCTGCCTGCTAC
Internal bar code:GGAACATGGTTCCGATAGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAAACACGCGCTTTGT
Suggested primer 2:TCACGGAGATGACCAAGCAC