Insertion junction: CLIP2.068037_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068037
Chromosome:mitogenome
Location:2683
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreMt.g802338 nad4,801494,ChrepMp02 NADH dehydrogenase subunit 4; (1 of 1) K03881 - NADH-ubiquinone oxidoreductase chain 4 (ND4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGAAACCCAATAGATCCAAGACGCACAAGGCACTAAGTACTAGAACC
Internal bar code:TCGGTTTTGCTGGTTGATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:19.2308
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGGCTATTGGTGACCG
Suggested primer 2:CAACACGGTTGAAAGCCCAG