Insertion junction: CLIP2.068041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068041
Chromosome:chromosome 17
Location:1648016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707750 (1 of 1) PTHR31040//PTHR31040:SF1 - FAMILY NOT NAMED // NURIM outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCAGACATCTACCTCAGTATCTCGCTCCTGCTACATGACGACACTTTG
Internal bar code:TTCCCACGTGATCCTACCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGGAACTGTGCAAACTG
Suggested primer 2:ACTTTACGCCTGCTGACTCC