Insertion junction: CLIP2.068047_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.068047
Chromosome:chromosome 6
Location:3868624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278184 (1 of 8) PTHR26379:SF144 - BTB/POZ DOMAIN-CONTAINING PROTEIN 19 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATCGAACGCCCTAGTGGCAGGGCATGGCTCCGGGGGGGGAGATGTGC
Internal bar code:GCTTTCGAATGTAGTGCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGCTTGCGTTTGATG
Suggested primer 2:TGAAACCAGAGTCCGTCGTG