Insertion junction: CLIP2.068049_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068049
Chromosome:chromosome 16
Location:6755512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672602 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTGCGCATGTTTCCGCCCGCATATTGGCATCCGTTAGTCGCTTTACA
Internal bar code:GGAAGGCGCTCGGTGCCAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2362
LEAP-Seq percent confirming:89.011
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTCCCATCACACTTCC
Suggested primer 2:TGTGGTGGGCCTAGATCGTA