Insertion junction: CLIP2.068054_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068054
Chromosome:chromosome 17
Location:2135260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711900 (1 of 4) PF03567 - Sulfotransferase family (Sulfotransfer_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGTATTACTATGTAAAACTTGCGTACAGAAGTTGTGGGCATTCACG
Internal bar code:GGAGGAACGCTAGTCGAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1907
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCCTCCTAACCGCATT
Suggested primer 2:TTTTTCAGCGTGCCGTTGAG