Insertion junction: CLIP2.068055_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068055
Chromosome:chromosome 16
Location:4709487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667100 LMR3 (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAAAGCATCAGAATACAAAACCATTACAACGGAACTCAAGCACGGTG
Internal bar code:GGTTGGTTCTTCACGCACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCAGTTCGTTCACAC
Suggested primer 2:ACGTCCTCAAGCACGCTTAA