Insertion junction: CLIP2.068055_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068055
Chromosome:chromosome 16
Location:4709509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667100 LMR3 (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCGTGTCTGTGGCGCGCTGCAAGTCGGCGGCAGCTTTGTACCACTA
Internal bar code:GGTTGGTTCTTCACGCACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4461
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCTCAAGCACGCTTAA
Suggested primer 2:CTGCTGCAGTTCGTTCACAC