Insertion junction: CLIP2.068057_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068057
Chromosome:plastome
Location:10697
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802266 2716978,psbK,ChreCp004 (1 of 1) K02712 - photosystem II PsbK protein (psbK); photosystem II K protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGGAAACTAACAGCTGCTTGCCAAACAAAAGCTAATAAAATAAAGAA
Internal bar code:GGGTTTTGCACATCACGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:52
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGGGTCGCAGGTTCGAA
Suggested primer 2:ACCAACTGAACCACCAGCTG