Insertion junction: CLIP2.068061_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068061
Chromosome:chromosome 3
Location:6646690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGTGAGGTTGCAAAGGGGAGAACCACACCGGCGGGTGGGGGGACCAC
Internal bar code:ACACGCGCTCGCCTTCTGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2346
LEAP-Seq percent confirming:91.0112
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGCTGCCAGATCCTCC
Suggested primer 2:TTCTCAAGCGTCACTGCCAT