Insertion junction: CLIP2.068064_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068064
Chromosome:chromosome 15
Location:896086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640152 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTGGCGTGCCTGGGCCGTGAACTGCATCGTCTTGGCACCGTGGTTG
Internal bar code:CCATGAACCGTGCTCGGCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:43.8356
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTCCGGGACCAAGACAG
Suggested primer 2:GCCTCGTACTCCTTCCCAAC