Insertion junction: CLIP2.068067_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068067
Chromosome:chromosome 11
Location:894076
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467652 RAA9 component psaA trans-splicing sub complex I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGGAGTTCGATGAAGAACTGTTTGGCGGCAGTAGCAGCAGAAGAC
Internal bar code:CATGGGGTGCGTGATACGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTCATCTCCGATGAGG
Suggested primer 2:CTACCCTTTTCAGCCCCTGG