Insertion junction: CLIP2.068086_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068086
Chromosome:chromosome 2
Location:2857927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094750 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGTGTCCTAAATGCCGACGGTCGGGACGACGGTAAGTGCGTTCGTTC
Internal bar code:ATAATAGTAGCTGTCTTCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3777
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCATCGTCGACTGCAA
Suggested primer 2:GAAGGAAACACCGCAAACCC