Insertion junction: CLIP2.068095_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068095
Chromosome:chromosome 3
Location:3383930
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166500 (1 of 2) IPR000104//IPR013083 - Antifreeze protein, type I // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAACGGTCCGCATGAACCATTCGCCCGCCACGCAAACGATCCGCAAG
Internal bar code:GGTGTAGGGCGTGGTAATCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5382
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGAAGGTTTTGGCCTGT
Suggested primer 2:CCGATACGACCTGTCACTCG