Insertion junction: CLIP2.068097_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068097
Chromosome:chromosome 3
Location:6605018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194800 (1 of 1) K14399 - polyribonucleotide 5'-hydroxyl-kinase (CLP1, HERB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCGGGTCATGTCAGCCCCCCATGTCCCTTGGACACCTGTACCATTT
Internal bar code:AACTGTGGCGGACAAAAAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4348
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCACAGCTTATGGGGTGT
Suggested primer 2:AGTGCGTGTGTGCTAATGGA