Insertion junction: CLIP2.068109_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068109
Chromosome:chromosome 8
Location:2219389
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g370200 (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGGTTGATGCGGCTTGGGTGGCGTCTTGCCGACGCCCGCCGTGCGCG
Internal bar code:TGTTGCTTGATGTGTGTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1497
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCGACACACCCATAGCT
Suggested primer 2:GGACATGTTGGTTGTGTGGC