Insertion junction: CLIP2.068110_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068110
Chromosome:chromosome 5
Location:718856
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g245350 (1 of 1) IPR003582//IPR009011 - ShKT domain // Mannose-6-phosphate receptor binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGTGCCTGCACATATCACACACTCACACACTCACACATCAGCACACG
Internal bar code:AGTCCAACTTTGCACCTGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGCATCTCCCCAATCG
Suggested primer 2:CTACGGATGTAGGTTCCCGC