Insertion junction: CLIP2.068113_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068113
Chromosome:chromosome 7
Location:3380274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335150 (1 of 1) IPR004333//IPR019831 - Transcription factor, SBP-box // Manganese/iron superoxide dismutase, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATGGTCTAGTTTGTCCCGTTTCCTAGTTGAGGCCAAGGGTAAGGGC
Internal bar code:GGAACGGCGTACTGCAAGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2409
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGCTATCTGACTCGCTG
Suggested primer 2:GCGTTCCGGTTTCGACAAAA