Insertion junction: CLIP2.068121_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068121
Chromosome:chromosome 6
Location:2271171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267100 SRP68 (1 of 1) K03107 - signal recognition particle subunit SRP68 (SRP68); Subunit of the Signal Recognition Particle 5'UTR
Cre06.g267150 (1 of 1) PTHR21231:SF8 - GPN-LOOP GTPASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGATGCTTTACCCAGACCGGCGTGGAACTCGTTCAGCGTCGACCGGGA
Internal bar code:AGGATACGAACATCCGATACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:311
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAAGGCATGGCTGGTTT
Suggested primer 2:CACCCCGTGCTTCTGTACTT