Insertion junction: CLIP2.068126_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.068126
Chromosome:chromosome 3
Location:3619948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168150 (1 of 2) PF00069//PF12796 - Protein kinase domain (Pkinase) // Ankyrin repeats (3 copies) (Ank_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTCCTCCTCCCCCTCGTCTCAACAGCCCGGACAGCTTTCAAGTGTTG
Internal bar code:CCTACGACACCGCCTTATAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAGTTGTTGCGGTTCTG
Suggested primer 2:AGACGTAACCAGAAGCAGGC