Insertion junction: CLIP2.068130_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068130
Chromosome:chromosome 4
Location:1230746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCAACGCCCACCTCCTTATCCTCAGCTCAGGACGCTTGTCCTCCTC
Internal bar code:GCCGAGCATTATTGGAGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGAGGGCTGGTTGTACG
Suggested primer 2:GCACACAACTGACAACGGAC