Insertion junction: CLIP2.068134_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068134
Chromosome:chromosome 6
Location:3049965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274850 HTR23,HTR4,HTR26,HTR6 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTGAAACATGGTTACCTCTTGAACAAGCGGATTCGGCCGGGAGCGAA
Internal bar code:ATGAGGATACACTGTTAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCTGGCTCCGGTATTGG
Suggested primer 2:GACCATCATGCCCAAGGACA