Insertion junction: CLIP2.068135_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068135
Chromosome:chromosome 6
Location:5506902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286500 3'UTR
Cre06.g286550 (1 of 1) PF12811 - Bax inhibitor 1 like (BaxI_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTGTTTTGTCAGCGGGCGTGGCCTTTGATGGCGGTGATGTGTCCCG
Internal bar code:TACGAGCACGTATGAAACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2668
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTTGTGTTCTAGGCGT
Suggested primer 2:TTGCCAGTAGTATCCGGGGA