Insertion junction: CLIP2.068140_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068140
Chromosome:chromosome 16
Location:337961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694208 (1 of 1) IPR001965//IPR011011//IPR019787//IPR028941 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger // WHIM2 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACAAAAGAGGATTTCGTGCAACAGGCGCCGGGGGCGCTGGATTGCTG
Internal bar code:GTCGTGTAGGCATCGTGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2366
LEAP-Seq percent confirming:87.7551
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCCATCACACACCCTC
Suggested primer 2:TATGACCCGTCGCTCATTGG