Insertion junction: CLIP2.068143_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.068143
Chromosome:chromosome 2
Location:4026753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102950 (1 of 1) K18999 - RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] (CPL3_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGACACATACCGCATGGCGGGTGTGGAATGTACGGGCGAGGTGAGGC
Internal bar code:GACCGGTATTCCTCACTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1435
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCCATAGGCAGCAGTG
Suggested primer 2:GCCGTGCTGCAAAGATATGG