Insertion junction: CLIP2.068151_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.068151
Chromosome:chromosome 6
Location:1233329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258583 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATATCGTCTAATACGGTAGTAGCGTCTGTCTGCAGTGGCCTCCGGGCT
Internal bar code:GTACAGGGGAACTGAACCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGCATCTACCTTGTTGT
Suggested primer 2:GCAACTGAGAGCAAAGCCAC