Insertion junction: CLIP2.068157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.068157
Chromosome:chromosome 2
Location:3187469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096737 (1 of 15) 3.4.21.72 - IgA-specific serine endopeptidase / Immunoglobulin A1 protease 3'UTR
lncRNA_TCONS_00041736 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACCCCTGGCCATCGCGTCCACCATAGTCGCGGGCCACGTCCACGCA
Internal bar code:TTGTGAGAGCACGCGTCTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1074
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCGGCTCCTCCAATTG
Suggested primer 2:AGCGACTTAGCCTGCAATGT