Insertion junction: CLIP2.068161_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.068161
Chromosome:chromosome 12
Location:3533700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496500 PHC70 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTTGTTATGGGTGGTTGGAGGTGTGGAACTGTGCATGGCTTGGAGTA
Internal bar code:TCTAGAGCCAGCTTCCTTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGTTGTAAGCGAGCCAT
Suggested primer 2:ATTGCGGTTAGGACACCTGG