Insertion junction: CLIP2.068175_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068175
Chromosome:chromosome 4
Location:3085427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGCCGTTACCCGCAGCCCGTCAGTGAGAGCCAAGGCCCCTGCCCAC
Internal bar code:GCCTACAATGTTTGATCTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3342
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:160

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCTAGGCGGGTTGGATA
Suggested primer 2:CCGCCTCTCTAAGCCTAAGC