Insertion junction: CLIP2.068175_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.068175
Chromosome:chromosome 12
Location:2265407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508550 PANB,PAN2,PANB1 (1 of 1) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase; Ketopantoate hydroxymethyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGTTGAAGCAAGGGCAGCTGAAAGTAAAGCTGAGCAACGAGTTCCAG
Internal bar code:CTCCGTCTCATGGGGACATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGTGTTCCTGGTACCCC
Suggested primer 2:CACGAATGCCATCACACGTC